CDS

Accession Number TCMCG015C57364
gbkey CDS
Protein Id XP_027090715.1
Location complement(join(12016824..12017436,12018219..12018368,12019645..12019696,12019876..12020307,12020395..12021051,12022078..12022144,12022218..12022556,12022656..12022783,12023143..12023308,12023388..12023437,12024676..12024746,12024873..12024933,12026115..12026245,12026452..12026645,12027471..12027584,12027658..12027779,12027873..12027927,12029196..12029287,12030175..12030289,12030387..12030469,12031094..12031237,12031715..12032159,12032237..12032287))
Gene LOC113711729
GeneID 113711729
Organism Coffea arabica

Protein

Length 1443aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027234914.1
Definition DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD DEAH box RNA helicase family protein
KEGG_TC -
KEGG_Module M00413        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10896        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03460        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000712        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031297        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0036297        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043240        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045005        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051304        [VIEW IN EMBL-EBI]
GO:0051307        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071821        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCTCCTCCTCCTCCACTCCTCTCCACATCGTCGACCAAGATAACGACGAATTTGATTGGGAGGCGGCAGTGAGGGAGATTGATGTGGCCTGTGCTCAAACCACAACTTCTTCTACTAATTATTGTGCTAATAACGGTTCTAATCACGTAATTAATGGCAAAATCCCTACTTATACTTCTTCAAATCCGAGAATTCAAGAAACCCACAAAAAATCAGTGCCCAATCAGAGCAATTTTGCTTATTTTGCTTCTTCTTCCCGGCAATTGACTCTAGATAGGTTTATTGGGATTGTTCCCAGAAACTCCAATGGGCACCAGAGGGAAAAGCACTGCAATGGGTTTTTAAAAAACAAGAATAATAATTTTAACAGTAATTGTCAGATTAATGTTGGTAATAGTGGTGAGGGACAGAAGGGGCAAGCTGAAGATGAAGAAGAAAATGTCGGCTTTGTCAAGATTGATCCTGAGGCAGCTAAGACTTGGATTTACCCAGTTAATATCCCTCTTCGTGACTATCAGCTCAATATTACGCGGACTGCTTTGTTTTCCAACACTTTAGTGGCATTGCCTACTGGGCTTGGGAAAACTCTTATTGCTGCTGTTGTAATGTATAACTATTTCAGATGGTTTCCAGAAGGAAAAATTGTATTTGCAGCTCCTTCTCGACCACTTGTACTGCAACAAATTGAAGCATGCCATAATGTTGTAGGAATACCACAGGAATGGACTATTGATCTGACAGGTCAAACAAGTCCCACAAGAAGAGCAGACCATTGGAGAAGTAAACGAGTTTTTTTTGTTACTCCCCAAGTTCTTGAGAAAGATATTTATTCTGGTTCATGTTTGGTGAAGCATCTTGTCTGTTTAGTGGTTGACGAGGCTCATCGTGCAACAGGCAACTATTCGTATTGTGTTGCAGTTCGTGAGTTGATGGCTGTTCCTGTGCAACTCAGAGTATTGGCTTTGACTGCAACACCAGGATCTAAGCAGCAGACCATCCAGCACGTAATCGATAATCTTCAAATATCAAGACTTGAATACCGAAGTGAAAGTGACCCTGATGTGATTCCTTACGTGCATGACAGAAAGATAGAGCTGATTGAGGTTGCTATGGGCAATGATGCGGTTGAAATAAATAATTTGATCTTGGAAGTAATACGCCCTTATGTTGCTCGGCTTTCTGCAATTGGGGTACTTAAAAATAGAGATTGCCAGACGTTAAGCCCATGTGATTTACTCAACTCGAGGGACAAATTTCGGGAAGCACCACCAGAAAACCTGCCTCATATTAAGTATGGAGAAGTTGAAGGATATTTTGGTGTACTCATAACGCTGTACCACATCAGGAAATTGCTGTCTAGCCATGGTATAAAGCCTGCATTTGAGATGCTTGCAGAAAAATTGCAACAGGGGTCTTTTGCACGTTTTATGAGTCGGAATGAAGTTCTTCTAAAAGCAAAACTTCTAATGCAGCAAAGCATATCTCATGGAGCTCCTAGTCCCAAATTGTCAAAATTGCTGGAAGTCTTGGTGGATCATTTTAAAATGAAAGATCCACTTGAGTCAAGGGTTATAATTTTCTCAAATTTCAGGGGAAGTGTAAGGGATATAATGAATGCATTAAAAGACATTGGGGAATTTGTAAAAGCTACTGAGTTCGTTGGTCAGACTTCAGGTAAAGCATTAAAGGGACAGTCACAAAAAGTTCAACAAGCTGTTTTGCAGAAATTTAGAGCTGGTGGGTACAATGTCATTGTTGCAACTTCAATTGGTGAAGAAGGTTTAGATATAATGGAAGTTGATCTTGTTATATGCTTTGATGCTAACATCTCACCATTGAGAATGATTCAGCGAATGGGCAGAACTGGAAGAAAGCATGAAGGACGAGTAGTTGTTTTAGCTTGTGAGGGGTCTGAATTAAAGGGCTACATGAGGAAACAAGCCAATAGCAAGGCTATTAAGAAGCACATGAGAAACGGGGGAGCAAATAGTTTCCAATTTCATTCAAGTCCGAGGATGATTCCGCATGTTTTCAAACCAGAGGTCCAGTTTGTAGAGCTTTCAATTGAACAGTTTGTTCCACGTGTAAAGAAAGTGAATGATGATGACCAGCCAATCCAGTCGCCTGCATATAAAGCCAAGTTAACAGATGCTGAGAATGACTTACTATCTAAATATTTCAGCACCACCAGGGAAAACACTTGGAAACCATCACTTATTGCCTTTCCTCATTTCCAAGCATTTCCGTCCAGAGTACACAAAGTGCTGCATTCATTTAGGACAGGGATTCTAATAGATGCAATGCAATGTTTACAAGGATTACCATTTTCTACATGCAGTACAGCTGTTAAAGTTGAGGATAGTGCCTCTCCAGAACCATGCTCAGCAAGTGAAGCTCTTGTACAGTGTAATGGCAAAATTAAAGCTTTTCTTACAGAAACAAGCACTTCTGGGGACTTTCCTATAGAGGATTGCATAAGAGAAGTTTCACTGGCTAGTTTAGAGCCCAAAGAGGATTTAAGAACTAGAGAGGATTCCTATGCGCTAGGTTCTCAAGGTTCTCAATGTAAAAACTTGGTCCATTCCTTTCTCTTCAGCTCTGGATTGATATCTGTAGATGATCTTGGGACAGTACAGGTTTTATCTGTGTCACAATTTCCAGTGAAAGAAGTTCTGCTTTCTAAAATTATGACTACCGGCAGAGCAGCTCCATTCTATCATCTGAAACAAAATATTGCATGCATTGATGCTTCCACTGATGTATGCGAAGAACGTGTGGGGAATGCAAAAGATGATTCTATGTCCCAGATAAGATCCAGTCAAGATGACAAAGATTGTGCATTTAAATTAAACAGCTGTAATGCATCAGGAGAAAAAACTTTAGGAGAGATTATTCTTGAGACTCCAATTCCCAAGCCAATGTCAGATGGAGGTGAGAGTATTAATAATAGTCCTGAAGATAGAGCACCTATGTTGTTTGCTGCTGAGGCCAATGATGATCCAATGGACGTTGAGTTTAGTCCCAGGCTTACTAACTTTATGGAGTCCGGTATTGTTCCAGAATCTCCTATAAGCAGTAGTGGAATGCCTGAGATTCAAAGAGATGATATTATGGTACCAGATCTTGTTTCAACCCCCATGGTCCATGCACAGTCAGTAGTGAAGTATTTGGGGCAGAATGAAATTAATGTCACTTCTTCGCTGACCAATGATATTTCTGCAAAACAAATGAAGAATAGTACTCCAGCAAGCAAATTTAGAACTCCAACTGTTGATGAATGTCGATCTCCTTTCATTAAATCACCAGACATTGGCTTTAGCAAAGACTGGCAATTGAATCCTGGAGGAAATTCACATGGTGTTAAACAAAGACGCAAGTTTAAAAGATTGCGCAAGCATGGAGATCTCTGTAGGGTTAAGCCTCAGGATTGCAAAGAACAGACAAGTGGCCCCACCAGAAACTTCACAAGTTCTTCTGTTGGTGCAGATGATGGTCAGAATCATCATCATAGAGGCGCGAAGTTCATCTCAAATAGAGCCAAACTGTTTGTTGAAGATGAAGCAGAGGTATCTTTGGAGGTTATGGTATCTTCTGATGAGGAAGATGAGCAGGAGGACAATTCATACGAAGATAGTTTTATTGATGATAGAATAAATCCTACAGCAAAAAGTACTCAAGCAGAAGAGAGTGGTATTGATATGATGGCTGTTTACAGGCGTTCCTTGCTCAGTCAATCACCATTAGTAGGAGTGGCAAATTTCTCTGAAGATTTTACTCCTAGTTCTGATGTTCCAAGAAATGAAAGAGCAAGCACTTCAGGATCAGAAAGTCATTTGGTTCAAAAGCCTGAGAATGGCTTAGAGTCTACCGCCAGGAATTCAGCATCCCTCCATTTCAATCTTGACAGAGTTTCCTCAGATGCTTTGCTCTCCAGAATTACTACTTCTCCAAAAGAACAAAAAAGCAAGATGGAGAATCGAAAGAGAAAATTATTCTGTAAATCTGGTTTCTTACCAGTACATAACTTAGAAAAAGAGTTTTTCATTGGTTCTGTCGCTTCTGGACACGACTCTATGTTGCATGAACAAACCGACAAAATTCAAGAAAATAGCAAAACGTTTCTGGACAATGACATCACAGAAAACAGGAATATCTTTGATGACGATCAATTCTACAATGCCATTGATCTTGATGCTATAGAAGAACAAGCTGCCAAATTAATTGGATTCAAAACGGACTACTCAAAACAGAATCAGGTACCTATTGCTGAACCAGTGCCAGTAAACCCTTCTCTTCTTGGTTCTCCTTCTTTTGATCTTGGAATTTGA
Protein:  
MASSSSTPLHIVDQDNDEFDWEAAVREIDVACAQTTTSSTNYCANNGSNHVINGKIPTYTSSNPRIQETHKKSVPNQSNFAYFASSSRQLTLDRFIGIVPRNSNGHQREKHCNGFLKNKNNNFNSNCQINVGNSGEGQKGQAEDEEENVGFVKIDPEAAKTWIYPVNIPLRDYQLNITRTALFSNTLVALPTGLGKTLIAAVVMYNYFRWFPEGKIVFAAPSRPLVLQQIEACHNVVGIPQEWTIDLTGQTSPTRRADHWRSKRVFFVTPQVLEKDIYSGSCLVKHLVCLVVDEAHRATGNYSYCVAVRELMAVPVQLRVLALTATPGSKQQTIQHVIDNLQISRLEYRSESDPDVIPYVHDRKIELIEVAMGNDAVEINNLILEVIRPYVARLSAIGVLKNRDCQTLSPCDLLNSRDKFREAPPENLPHIKYGEVEGYFGVLITLYHIRKLLSSHGIKPAFEMLAEKLQQGSFARFMSRNEVLLKAKLLMQQSISHGAPSPKLSKLLEVLVDHFKMKDPLESRVIIFSNFRGSVRDIMNALKDIGEFVKATEFVGQTSGKALKGQSQKVQQAVLQKFRAGGYNVIVATSIGEEGLDIMEVDLVICFDANISPLRMIQRMGRTGRKHEGRVVVLACEGSELKGYMRKQANSKAIKKHMRNGGANSFQFHSSPRMIPHVFKPEVQFVELSIEQFVPRVKKVNDDDQPIQSPAYKAKLTDAENDLLSKYFSTTRENTWKPSLIAFPHFQAFPSRVHKVLHSFRTGILIDAMQCLQGLPFSTCSTAVKVEDSASPEPCSASEALVQCNGKIKAFLTETSTSGDFPIEDCIREVSLASLEPKEDLRTREDSYALGSQGSQCKNLVHSFLFSSGLISVDDLGTVQVLSVSQFPVKEVLLSKIMTTGRAAPFYHLKQNIACIDASTDVCEERVGNAKDDSMSQIRSSQDDKDCAFKLNSCNASGEKTLGEIILETPIPKPMSDGGESINNSPEDRAPMLFAAEANDDPMDVEFSPRLTNFMESGIVPESPISSSGMPEIQRDDIMVPDLVSTPMVHAQSVVKYLGQNEINVTSSLTNDISAKQMKNSTPASKFRTPTVDECRSPFIKSPDIGFSKDWQLNPGGNSHGVKQRRKFKRLRKHGDLCRVKPQDCKEQTSGPTRNFTSSSVGADDGQNHHHRGAKFISNRAKLFVEDEAEVSLEVMVSSDEEDEQEDNSYEDSFIDDRINPTAKSTQAEESGIDMMAVYRRSLLSQSPLVGVANFSEDFTPSSDVPRNERASTSGSESHLVQKPENGLESTARNSASLHFNLDRVSSDALLSRITTSPKEQKSKMENRKRKLFCKSGFLPVHNLEKEFFIGSVASGHDSMLHEQTDKIQENSKTFLDNDITENRNIFDDDQFYNAIDLDAIEEQAAKLIGFKTDYSKQNQVPIAEPVPVNPSLLGSPSFDLGI